Toby. Thank you for that clear explanation with the necessary foundation laid out to make it easy to grasp the higher concepts. My explanation was "tongue in cheek" and a feeble stab at humor. Yours was the real deal. May I ask where you have found your information about the effects of the helmholtz resonance of the mouthpiece that you refer to? Benade indicates the playing frequency (Frs) of the saxophone mouthpiece on its neck must come close to matching the natural resonant frequency of the missing cone calculated by the formula Frs = v/2xo where v is the velocity of sound and xo is the length of the "missing cone" including the length of the neck. The part I am still unclear on is how the "equivalent volume" of the mouthpiece which is roughly 30% larger than its geometric volume ties into the ideas about the helmholtz frequency.
John, Fletcher and Rossing talk about the two orders of correction in their book. This jibes with Benade. We had a huge debate on SOTW about the meaning of the mpc "on its neck", but it seems clear to me that it is the resonant frequency of the interior of the mpc as it sits on the neck in the correct position, and has nothing to do with the combination of mpc and neck together.
I said I wasn't going to get into it, but you asked
A classic Helmholtz resonator is a mass of air enclosed in a bulb, with a neck. A true Helmholtz resonator is notable for the fact that it has no partials--it is the fundamental or nothing. Bottles are not true Helmholtz resonators, for example, because one can overblow other frequencies, but the Helmholtz resonance is considered to be the main fundamental frequency that sounds when air is blown across the opening of the neck. Because any shading of the hole can alter the sounding frequency, a better way to measure the frequency is with a "pop" test"--tap the opening and listen for the frequency created.
The Helmholtz resonance of a given enclosed volume of air depends (apart from the usual suspects of air temperature and composition) on three geometric factors: the mass of air enclosed in the bulb or chamber, the length of the neck and the diameter of the neck opening. More air, longer neck and smaller neck opening all lower the resonance frequency.
So actually we have two parameters to play with independent of the actual volume in order to vary the frequency. But on a sax, the opening diameter is fixed for all practical purposes: it is the inner diameter of the neck. That leaves us with the question of where the bulb ends and the neck begins, because a mpc is not at all a classical Helmholtz resonator. Still, by changing the amount of volume in the chamber as compared to that in the throat, there should be the possibility of changing the resonant frequency of the mpc as it sits on the neck.
With the sax, unfortunately, the fact that we must move it on the neck makes tailoring the Helmholtz frequency difficult. On the tárogató, for instance, the throat diameter can be varied in order to change that value, but the throat diameter cannot be less than will fit on the cork. If you want to experiment, you can try temporarily reducing the neck diameter with plasticine, for instance, or reducing the diameter at the top of the throat. Unfortunately, these are not really good adjustments, because they introduce discontinuities in the bore. In the case of the neck, the reduction will only be at the very end of the neck, and in the case of the mouthpiece, the throat diameter will widen back out before it comes to the neck insertion point.
As to the question of the actual volume being different from the theoretical volume, there's that pesky thing called a "reed". The mechanical parameters of the reed definitely affect the sounding frequency, as do the aeroacoustics near the reed tip I imagine. I am not familiar with this stuff, and I believe it is quite complex and probably not well modeled, although I have seen papers on it. Here is a taste:
http://viennatalk.mdw.ac.at/addons/Add_01_49_Chatziioannou.pdf